{"display":true,"structure":{"allele":{"alpha":{"identifier":"ipd-imgt:HLA35266","locus":"hla-a","match_type":"histo:fuzzy","name":"HLA-A*02:01","slug":"hla_a_02_01","species_stem":"hla"},"beta":{}},"assemblies":{"1":{"assembly_name":"3mr9_1","chains":["A","B","P"],"downloaded_at":"2022-11-09T14:35:45.784111"}},"assembly_count":null,"assigned_chains":{"beta2m":{"chains":["B"],"match_type":"histo:assign_chains","score":0.99,"sequence":"MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM"},"class_i_alpha":{"chains":["A"],"match_type":"histo:assign_chains","score":0.96,"sequence":"GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEPGSLHHILDAQKMVWNHR"},"peptide":{"chains":["P"],"match_type":"histo:classify_peptide","sequence":"NLVPAVATV"}},"chronology":{"deposition_date":"2010-04-29","deposition_year":2010,"release_date":"2011-05-25","release_year":2011,"revision_date":"2011-07-13","revision_year":2011},"class":"class_i","classical":true,"complex_type":"class_i_with_peptide","components":["class_i_alpha","beta2m","peptide"],"experimental_method":"X-ray diffraction","facets":{},"ligands":[],"locus":"hla-a","manually_edited":{},"missing_residues":[],"page_title":"3MR9 | HLA-A*02:01 binding \"NLVPAVATV\"","pdb_code":"3mr9","pdb_title":"Crystal structure of MHC Class I hla-a2 molecule complexed with hcmv pp65-495-503 nonapeptide m5a variant","peptide":{"P":{"actual_length":9,"actual_sequence":"NLVPAVATV","chain_id":"P","features":["correct_sequence_and_length"],"full_length":9,"full_sequence":"NLVPAVATV"}},"peptide_length":9,"peptide_length_name":"nonamer","peptide_neighbours":{"1":{"neighbours":[{"position":167,"residue":"TRP"},{"position":7,"residue":"TYR"},{"position":171,"residue":"TYR"},{"position":5,"residue":"MET"},{"position":59,"residue":"TYR"},{"position":63,"residue":"GLU"},{"position":66,"residue":"LYS"},{"position":33,"residue":"PHE"},{"position":159,"residue":"TYR"},{"position":163,"residue":"THR"}],"position":1,"residue":"ASN"},"2":{"neighbours":[{"position":63,"residue":"GLU"},{"position":66,"residue":"LYS"},{"position":45,"residue":"MET"},{"position":9,"residue":"PHE"},{"position":159,"residue":"TYR"},{"position":7,"residue":"TYR"},{"position":67,"residue":"VAL"},{"position":70,"residue":"HIS"},{"position":99,"residue":"TYR"}],"position":2,"residue":"LEU"},"3":{"neighbours":[{"position":156,"residue":"LEU"},{"position":70,"residue":"HIS"},{"position":99,"residue":"TYR"},{"position":66,"residue":"LYS"},{"position":159,"residue":"TYR"}],"position":3,"residue":"VAL"},"4":{"neighbours":[{"position":66,"residue":"LYS"},{"position":159,"residue":"TYR"}],"position":4,"residue":"PRO"},"6":{"neighbours":[{"position":73,"residue":"THR"},{"position":97,"residue":"ARG"},{"position":70,"residue":"HIS"}],"position":6,"residue":"VAL"},"7":{"neighbours":[{"position":77,"residue":"ASP"},{"position":73,"residue":"THR"},{"position":152,"residue":"VAL"},{"position":147,"residue":"TRP"},{"position":97,"residue":"ARG"}],"position":7,"residue":"ALA"},"8":{"neighbours":[{"position":76,"residue":"VAL"},{"position":77,"residue":"ASP"},{"position":73,"residue":"THR"},{"position":147,"residue":"TRP"},{"position":143,"residue":"THR"},{"position":80,"residue":"THR"},{"position":146,"residue":"LYS"}],"position":8,"residue":"THR"},"9":{"neighbours":[{"position":81,"residue":"LEU"},{"position":146,"residue":"LYS"},{"position":116,"residue":"TYR"},{"position":84,"residue":"TYR"},{"position":77,"residue":"ASP"},{"position":143,"residue":"THR"},{"position":80,"residue":"THR"},{"position":147,"residue":"TRP"},{"position":123,"residue":"TYR"}],"position":9,"residue":"VAL"}},"peptide_sequence":"NLVPAVATV","pockets":{"a":{"a159":{"number":159,"one_letter":"Y","three_letter":"TYR"},"a163":{"number":163,"one_letter":"T","three_letter":"THR"},"a167":{"number":167,"one_letter":"W","three_letter":"TRP"},"a171":{"number":171,"one_letter":"Y","three_letter":"TYR"},"a5":{"number":5,"one_letter":"M","three_letter":"MET"},"a59":{"number":59,"one_letter":"Y","three_letter":"TYR"},"a63":{"number":63,"one_letter":"E","three_letter":"GLU"},"a66":{"number":66,"one_letter":"K","three_letter":"LYS"},"a7":{"number":7,"one_letter":"Y","three_letter":"TYR"}},"b":{"a24":{"number":24,"one_letter":"A","three_letter":"ALA"},"a34":{"number":34,"one_letter":"V","three_letter":"VAL"},"a45":{"number":45,"one_letter":"M","three_letter":"MET"},"a63":{"number":63,"one_letter":"E","three_letter":"GLU"},"a66":{"number":66,"one_letter":"K","three_letter":"LYS"},"a67":{"number":67,"one_letter":"V","three_letter":"VAL"},"a7":{"number":7,"one_letter":"Y","three_letter":"TYR"},"a70":{"number":70,"one_letter":"H","three_letter":"HIS"},"a9":{"number":9,"one_letter":"F","three_letter":"PHE"},"a99":{"number":99,"one_letter":"Y","three_letter":"TYR"}},"c":{"a70":{"number":70,"one_letter":"H","three_letter":"HIS"},"a73":{"number":73,"one_letter":"T","three_letter":"THR"},"a74":{"number":74,"one_letter":"H","three_letter":"HIS"},"a9":{"number":9,"one_letter":"F","three_letter":"PHE"},"a97":{"number":97,"one_letter":"R","three_letter":"ARG"}},"d":{"a114":{"number":114,"one_letter":"H","three_letter":"HIS"},"a155":{"number":155,"one_letter":"Q","three_letter":"GLN"},"a156":{"number":156,"one_letter":"L","three_letter":"LEU"},"a159":{"number":159,"one_letter":"Y","three_letter":"TYR"},"a160":{"number":160,"one_letter":"L","three_letter":"LEU"},"a99":{"number":99,"one_letter":"Y","three_letter":"TYR"}},"e":{"a114":{"number":114,"one_letter":"H","three_letter":"HIS"},"a147":{"number":147,"one_letter":"W","three_letter":"TRP"},"a152":{"number":152,"one_letter":"V","three_letter":"VAL"},"a156":{"number":156,"one_letter":"L","three_letter":"LEU"},"a97":{"number":97,"one_letter":"R","three_letter":"ARG"}},"f":{"a116":{"number":116,"one_letter":"Y","three_letter":"TYR"},"a123":{"number":123,"one_letter":"Y","three_letter":"TYR"},"a143":{"number":143,"one_letter":"T","three_letter":"THR"},"a146":{"number":146,"one_letter":"K","three_letter":"LYS"},"a147":{"number":147,"one_letter":"W","three_letter":"TRP"},"a77":{"number":77,"one_letter":"D","three_letter":"ASP"},"a80":{"number":80,"one_letter":"T","three_letter":"THR"},"a81":{"number":81,"one_letter":"L","three_letter":"LEU"},"a84":{"number":84,"one_letter":"Y","three_letter":"TYR"},"a95":{"number":95,"one_letter":"V","three_letter":"VAL"}}},"publication":{"abstract":null,"bibjson":{"author":[{"initials":null,"lastname":null,"name":"Reiser, J.-B."},{"initials":null,"lastname":null,"name":"Le Gorrec, M."},{"initials":null,"lastname":null,"name":"Chouquet, A."},{"initials":null,"lastname":null,"name":"Debeaupuis, E."},{"initials":null,"lastname":null,"name":"Echasserieau, K."},{"initials":null,"lastname":null,"name":"Saulquin, X."},{"initials":null,"lastname":null,"name":"Bonneville, M."},{"initials":null,"lastname":null,"name":"Housset, D."}],"identifier":[],"title":"Crystal Structure of MHC class I HLA-A2 molecule complexed with short peptide","type":"article","url":""},"in_pmc":null,"in_pmce":null,"open_access":null},"resolution":"1.93","same_as":{"pdbe":{"url":"https://www.ebi.ac.uk/pdbe/entry/pdb/3mr9"},"rcsb":{"url":"https://www.rcsb.org/structure/3mr9"}},"species":{"common_name":"Human","match_type":"histo:assign_species","scientific_name":"Homo sapiens","slug":"homo_sapiens"},"tcr":null,"title":"HLA-A*02:01 binding \"NLVPAVATV\" at 1.93Å resolution","unique_chain_count":3}}