{"display":true,"structure":{"allele":{"alpha":{"identifier":"ipd-imgt:HLA35266","locus":"hla-a","match_type":"histo:fuzzy","name":"HLA-A*02:01","slug":"hla_a_02_01","species_stem":"hla"},"beta":{}},"assemblies":{"1":{"assembly_name":"5nht_1","chains":["H","L","P","A","B"],"downloaded_at":"2022-11-09T14:40:13.627071"}},"assembly_count":null,"assigned_chains":{"beta2m":{"chains":["L"],"match_type":"histo:assign_chains","score":0.99,"sequence":"MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM"},"class_i_alpha":{"chains":["H"],"match_type":"histo:assign_chains","score":0.99,"sequence":"GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEP"},"peptide":{"chains":["P"],"match_type":"histo:classify_peptide","sequence":"ELAGIGILTV"},"tcr_alpha":{"chains":["A"],"match_type":"stcrdab","sequence":"MQQKEVEQNSGPLSVPEGAIASLNCTYSDRGSQSFFWYRQYSGKSPELIMSIYSNGDKEDGRFTAQLNKASQYVSLLIRDSQPSDSATYLCAVGGGADGLTFGKGTHLIIQPYIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPENDGGGCK","subgroup":"TRAV12"},"tcr_beta":{"chains":["B"],"match_type":"stcrdab","sequence":"MGITQSPKYLFRKEGQNVTLSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSQGLAGAGELFFGEGSRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYCLSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRADQDRGGGCD","subgroup":"TRBV19"}},"chronology":{"deposition_date":"2017-03-22","deposition_year":2017,"release_date":"2018-05-16","release_year":2018,"revision_date":"2018-05-16","revision_year":2018},"class":"class_i","classical":true,"complex_type":"class_i_with_peptide_and_alpha_beta_tcr","components":["class_i_alpha","beta2m","peptide","tcr_alpha","tcr_beta"],"experimental_method":"X-ray diffraction","facets":{},"ligands":[],"locus":"hla-a","manually_edited":{},"missing_residues":[],"page_title":"5NHT | HLA-A*02:01 presenting \"ELAGIGILTV\" to Alpha/Beta T cell receptor","pdb_code":"5nht","pdb_title":"human 199.54-16 TCR in complex with Melan-A/MART-1 (26-35) peptide and HLA-A2","peptide":{"P":{"actual_length":10,"actual_sequence":"ELAGIGILTV","chain_id":"P","features":["correct_sequence_and_length"],"full_length":10,"full_sequence":"ELAGIGILTV"}},"peptide_length":10,"peptide_length_name":"decamer","peptide_neighbours":{"1":{"neighbours":[{"position":5,"residue":"MET"},{"position":159,"residue":"TYR"},{"position":59,"residue":"TYR"},{"position":7,"residue":"TYR"},{"position":167,"residue":"TRP"},{"position":66,"residue":"LYS"},{"position":171,"residue":"TYR"},{"position":63,"residue":"GLU"}],"position":1,"residue":"GLU"},"10":{"neighbours":[{"position":147,"residue":"TRP"},{"position":143,"residue":"THR"},{"position":123,"residue":"TYR"},{"position":80,"residue":"THR"},{"position":146,"residue":"LYS"},{"position":116,"residue":"TYR"},{"position":81,"residue":"LEU"},{"position":84,"residue":"TYR"},{"position":77,"residue":"ASP"},{"position":142,"residue":"THR"}],"position":10,"residue":"VAL"},"2":{"neighbours":[{"position":159,"residue":"TYR"},{"position":7,"residue":"TYR"},{"position":66,"residue":"LYS"},{"position":99,"residue":"TYR"},{"position":9,"residue":"PHE"},{"position":63,"residue":"GLU"},{"position":67,"residue":"VAL"},{"position":45,"residue":"MET"},{"position":70,"residue":"HIS"}],"position":2,"residue":"LEU"},"3":{"neighbours":[{"position":70,"residue":"HIS"},{"position":159,"residue":"TYR"},{"position":66,"residue":"LYS"},{"position":99,"residue":"TYR"}],"position":3,"residue":"ALA"},"4":{"neighbours":[{"position":159,"residue":"TYR"},{"position":66,"residue":"LYS"}],"position":4,"residue":"GLY"},"5":{"neighbours":[{"position":159,"residue":"TYR"},{"position":156,"residue":"LEU"},{"position":155,"residue":"GLN"}],"position":5,"residue":"ILE"},"6":{"neighbours":[{"position":114,"residue":"HIS"},{"position":156,"residue":"LEU"},{"position":155,"residue":"GLN"},{"position":152,"residue":"VAL"}],"position":6,"residue":"GLY"},"7":{"neighbours":[{"position":114,"residue":"HIS"},{"position":152,"residue":"VAL"},{"position":155,"residue":"GLN"},{"position":99,"residue":"TYR"},{"position":97,"residue":"ARG"},{"position":73,"residue":"THR"},{"position":70,"residue":"HIS"}],"position":7,"residue":"ILE"},"8":{"neighbours":[{"position":152,"residue":"VAL"},{"position":97,"residue":"ARG"},{"position":147,"residue":"TRP"},{"position":150,"residue":"ALA"},{"position":77,"residue":"ASP"},{"position":146,"residue":"LYS"},{"position":73,"residue":"THR"}],"position":8,"residue":"LEU"},"9":{"neighbours":[{"position":76,"residue":"VAL"},{"position":77,"residue":"ASP"},{"position":146,"residue":"LYS"},{"position":73,"residue":"THR"},{"position":147,"residue":"TRP"}],"position":9,"residue":"THR"}},"peptide_sequence":"ELAGIGILTV","pockets":{"a":{"a159":{"number":159,"one_letter":"Y","three_letter":"TYR"},"a163":{"number":163,"one_letter":"T","three_letter":"THR"},"a167":{"number":167,"one_letter":"W","three_letter":"TRP"},"a171":{"number":171,"one_letter":"Y","three_letter":"TYR"},"a5":{"number":5,"one_letter":"M","three_letter":"MET"},"a59":{"number":59,"one_letter":"Y","three_letter":"TYR"},"a63":{"number":63,"one_letter":"E","three_letter":"GLU"},"a66":{"number":66,"one_letter":"K","three_letter":"LYS"},"a7":{"number":7,"one_letter":"Y","three_letter":"TYR"}},"b":{"a24":{"number":24,"one_letter":"A","three_letter":"ALA"},"a34":{"number":34,"one_letter":"V","three_letter":"VAL"},"a45":{"number":45,"one_letter":"M","three_letter":"MET"},"a63":{"number":63,"one_letter":"E","three_letter":"GLU"},"a66":{"number":66,"one_letter":"K","three_letter":"LYS"},"a67":{"number":67,"one_letter":"V","three_letter":"VAL"},"a7":{"number":7,"one_letter":"Y","three_letter":"TYR"},"a70":{"number":70,"one_letter":"H","three_letter":"HIS"},"a9":{"number":9,"one_letter":"F","three_letter":"PHE"},"a99":{"number":99,"one_letter":"Y","three_letter":"TYR"}},"c":{"a70":{"number":70,"one_letter":"H","three_letter":"HIS"},"a73":{"number":73,"one_letter":"T","three_letter":"THR"},"a74":{"number":74,"one_letter":"H","three_letter":"HIS"},"a9":{"number":9,"one_letter":"F","three_letter":"PHE"},"a97":{"number":97,"one_letter":"R","three_letter":"ARG"}},"d":{"a114":{"number":114,"one_letter":"H","three_letter":"HIS"},"a155":{"number":155,"one_letter":"Q","three_letter":"GLN"},"a156":{"number":156,"one_letter":"L","three_letter":"LEU"},"a159":{"number":159,"one_letter":"Y","three_letter":"TYR"},"a160":{"number":160,"one_letter":"L","three_letter":"LEU"},"a99":{"number":99,"one_letter":"Y","three_letter":"TYR"}},"e":{"a114":{"number":114,"one_letter":"H","three_letter":"HIS"},"a147":{"number":147,"one_letter":"W","three_letter":"TRP"},"a152":{"number":152,"one_letter":"V","three_letter":"VAL"},"a156":{"number":156,"one_letter":"L","three_letter":"LEU"},"a97":{"number":97,"one_letter":"R","three_letter":"ARG"}},"f":{"a116":{"number":116,"one_letter":"Y","three_letter":"TYR"},"a123":{"number":123,"one_letter":"Y","three_letter":"TYR"},"a143":{"number":143,"one_letter":"T","three_letter":"THR"},"a146":{"number":146,"one_letter":"K","three_letter":"LYS"},"a147":{"number":147,"one_letter":"W","three_letter":"TRP"},"a77":{"number":77,"one_letter":"D","three_letter":"ASP"},"a80":{"number":80,"one_letter":"T","three_letter":"THR"},"a81":{"number":81,"one_letter":"L","three_letter":"LEU"},"a84":{"number":84,"one_letter":"Y","three_letter":"TYR"},"a95":{"number":95,"one_letter":"V","three_letter":"VAL"}}},"publication":{"abstract":null,"bibjson":{"author":[{"initials":null,"lastname":null,"name":"Exertier, C."},{"initials":null,"lastname":null,"name":"Reiser, J.-B."},{"initials":null,"lastname":null,"name":"Housset, D."}],"identifier":[],"title":"human 199.54-16 TCR in complex with Melan-A/MART-1 (26-35) peptide and HLA-A2","type":"article","url":""},"in_pmc":null,"in_pmce":null,"open_access":null},"resolution":"3.20","same_as":{"pdbe":{"url":"https://www.ebi.ac.uk/pdbe/entry/pdb/5nht"},"rcsb":{"url":"https://www.rcsb.org/structure/5nht"},"stcrdab":{"url":"http://opig.stats.ox.ac.uk/webapps/stcrdab/StrViewer?pdb=5nht"}},"species":{"common_name":"Human","match_type":"histo:assign_species","scientific_name":"Homo sapiens","slug":"homo_sapiens"},"tcr":{"alpha":{"chains":["A"],"subgroup":"TRAV12"},"beta":{"chains":["B"],"subgroup":"TRBV19"},"mhc_type":"class_i","pdb_code":"5nht"},"title":"HLA-A*02:01 presenting \"ELAGIGILTV\" to Alpha/Beta T cell receptor at 3.20Å resolution","unique_chain_count":5}}