{"display":true,"structure":{"allele":{"alpha":{"identifier":"uniprot:O46882","locus":"dla-88","match_type":"histo:override","mutations":[],"name":"DLA-88*001:01:","note":"Match to new nomenclature","score":null,"slug":"dla_88_001_01","species_stem":"dla"},"beta":{}},"assemblies":{"1":{"assembly_name":"7cjq_1","chains":["A","B","C"],"downloaded_at":"2022-11-09T14:33:35.716535"},"2":{"assembly_name":"7cjq_2","chains":["D","E","F"],"downloaded_at":"2022-11-09T14:33:36.131601"}},"assembly_count":null,"assigned_chains":{"beta2m":{"chains":["B","E"],"match_type":"histo:assign_chains","score":0.93,"sequence":"MVQHPPKIQVYSRHPAENGKPNFLNCYVSGFHPPEIEIDLLKNGKEMKAEQTDLSFSKDWTFYLLVHTEFTPNEQDEFSCRVKHVTLSEPQIVKWDRDN"},"class_i_alpha":{"chains":["A","D"],"match_type":"histo:assign_chains","score":0.95,"sequence":"GSHSLRYFYTSVSRPGRGDPRFIAVGYVDDTQFVRFDSDAATGRMEPRAPWMEQEGPEYWDRETRTVKETAQRYRVDLDTLRGYYNQSEAGSHTRQTMYGCDLGPGGRLLRGYSQDAYDGADYIALNEDLRSWTAADTAAQITRRKWEAAGTAEHDRNYLETTCVEWLRRYLEMGKETLLRAEPPSTRVTRHPISDHEVTLRCWALGFYPAEITLTWQRDGEDQTQDTEVVDTRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLAEPVTRRWE"},"peptide":{"chains":["C","F"],"match_type":"histo:classify_peptide","sequence":"RTISYTYPF"}},"chronology":{"deposition_date":"2020-07-12","deposition_year":2020,"release_date":"2020-08-26","release_year":2020,"revision_date":"2020-09-30","revision_year":2020},"class":"class_i","classical":true,"complex_type":"class_i_with_peptide","components":["class_i_alpha","beta2m","peptide"],"experimental_method":"X-ray diffraction","facets":{},"ligands":[],"locus":"dla-88","manually_edited":{},"missing_residues":[],"page_title":"7CJQ | DLA-88*001:01: binding \"RTISYTYPF\"","pdb_code":"7cjq","pdb_title":"Structure of dla-88*001:01","peptide":{"C":{"actual_length":9,"actual_sequence":"RTISYTYPF","chain_id":"C","features":["correct_sequence_and_length"],"full_length":9,"full_sequence":"RTISYTYPF"},"F":{"actual_length":9,"actual_sequence":"RTISYTYPF","chain_id":"F","features":["correct_sequence_and_length"],"full_length":9,"full_sequence":"RTISYTYPF"}},"peptide_length":9,"peptide_length_name":"nonamer","peptide_neighbours":{"1":{"neighbours":[{"position":160,"residue":"TYR"},{"position":60,"residue":"TYR"},{"position":63,"residue":"ARG"},{"position":8,"residue":"TYR"},{"position":6,"residue":"LEU"},{"position":164,"residue":"THR"},{"position":64,"residue":"GLU"},{"position":168,"residue":"TRP"},{"position":172,"residue":"TYR"}],"position":1,"residue":"ARG"},"2":{"neighbours":[{"position":67,"residue":"THR"},{"position":8,"residue":"TYR"},{"position":100,"residue":"TYR"},{"position":46,"residue":"MET"},{"position":64,"residue":"GLU"},{"position":68,"residue":"VAL"},{"position":160,"residue":"TYR"},{"position":10,"residue":"TYR"}],"position":2,"residue":"THR"},"3":{"neighbours":[{"position":156,"residue":"HIS"},{"position":74,"residue":"ARG"},{"position":157,"residue":"ASP"},{"position":67,"residue":"THR"},{"position":71,"residue":"THR"},{"position":100,"residue":"TYR"},{"position":160,"residue":"TYR"},{"position":10,"residue":"TYR"}],"position":3,"residue":"ILE"},"4":{"neighbours":[{"position":67,"residue":"THR"},{"position":71,"residue":"THR"},{"position":70,"residue":"GLU"},{"position":74,"residue":"ARG"},{"position":63,"residue":"ARG"}],"position":4,"residue":"SER"},"5":{"neighbours":[{"position":156,"residue":"HIS"},{"position":74,"residue":"ARG"}],"position":5,"residue":"TYR"},"6":{"neighbours":[{"position":10,"residue":"TYR"},{"position":75,"residue":"TYR"},{"position":71,"residue":"THR"},{"position":74,"residue":"ARG"}],"position":6,"residue":"THR"},"7":{"neighbours":[{"position":156,"residue":"HIS"},{"position":157,"residue":"ASP"},{"position":78,"residue":"ASP"},{"position":153,"residue":"THR"},{"position":148,"residue":"TRP"},{"position":152,"residue":"GLY"},{"position":151,"residue":"ALA"}],"position":7,"residue":"TYR"},"8":{"neighbours":[{"position":78,"residue":"ASP"},{"position":147,"residue":"LYS"},{"position":148,"residue":"TRP"},{"position":144,"residue":"THR"}],"position":8,"residue":"PRO"},"9":{"neighbours":[{"position":96,"residue":"ARG"},{"position":125,"residue":"ILE"},{"position":81,"residue":"THR"},{"position":124,"residue":"TYR"},{"position":78,"residue":"ASP"},{"position":85,"residue":"TYR"},{"position":117,"residue":"ASP"},{"position":144,"residue":"THR"},{"position":147,"residue":"LYS"},{"position":82,"residue":"LEU"},{"position":148,"residue":"TRP"}],"position":9,"residue":"PHE"}},"peptide_sequence":"RTISYTYPF","publication":{"abstract":null,"bibjson":{"author":[{"initials":null,"lastname":null,"name":"Sun, Y.J."},{"initials":null,"lastname":null,"name":"Ma, L.Z."},{"initials":null,"lastname":null,"name":"Li, S."}],"identifier":[],"title":"Structure of canine MHC class I at 2.7 Angstroms resolution","type":"article","url":""},"in_pmc":null,"in_pmce":null,"open_access":null},"resolution":"2.70","same_as":{"pdbe":{"url":"https://www.ebi.ac.uk/pdbe/entry/pdb/7cjq"},"rcsb":{"url":"https://www.rcsb.org/structure/7cjq"}},"species":{"common_name":"Domestic dog","match_type":"histo:assign_species","scientific_name":"Canis lupus familiaris","slug":"canis_lupus_familiaris"},"tcr":null,"title":"DLA-88*001:01: binding \"RTISYTYPF\" at 2.70Å resolution","unique_chain_count":3}}